Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906792.1_cds_XP_016456977.1_50750
CDS Infomation

[gene=LOC107780879] [db_xref=GeneID:107780879] [protein=apoptotic chromatin condensation inducer in the nucleus-like isoform X5] [protein_id=XP_016456977.1] [location=complement(join(84561..84977,85069..85220,85306..85506,86131..86436,86896..87790))] [gbkey=CDS]
Sequence

ATGTCGTCGCCGTATCCCATTATTGATAATCCGCCAATTGATCAGTTGAAGGTCACAGAG
CTGAAAGAAGAGCTTAAGAGACGTAAGCTGCCCATTAAGGGGTTGAAGCAAGAGTTGGTA
AAGCGATTAGCTGAAGCAATCCTCCAAGAACAGGATGCTGCTCAGTCTAAGTCTGAGAAC
GATAGTGATTCCACGCTTGGGCCAAAGGACGAAATGGCTGAGCCTGTTGATTCTGAGAAT
TCCAAGGATGATTTTGATGTTGGCAATATCACAGATAAGAAAGCGGATGAGAAAATAAGC
GAGGTTGATGCAGCTGAAAACAGAGTGCAATCGGATGAAGGGAAATTCTCAACTGAGGAG
CCGGTTGGTGGTGCTATTTCTACTATGGTTGAAAAGGATCCGATAGACCAATTTGGTGAT
GCGAAAAGCAGTGCTCCAACCGAAGAGGACCAGATAGCTGAGGTCAGTGTTGTGCAAACC
GGTGAACATGTCAGTGTGAGTGTAGAGTCTGCCACAGCTTTAAGTGGACAGGACTCACTA
AAATATGAAACCCAGAATGAGAGTGGAGATTTAAAAGAGCAGTTGGAGAATCCCATTTCA
AATTCTTCACTAGTGGAGGAAAAGGTCAGTTCATCCATTCTGGAAAGGCAGGTATCTGAG
GTCAGCCCTGTTTTAGGGTTCCAAGTAAAATCTGATTTTGTTTCCACTGATGTTTCAATT
GGTGAAAAAACAGAACTGATGGATAACGTAATAGCTAATGATGTCAAGTTAGAATTAGAT
GTTAAACCTGAGATGGTGCAGCTATTGTCGAGCAGTAATGTCCCTGATGATGCAAAATTG
CATCCTATGGATGTAGAAGAACCACATGACAAGAAAGTATCTACAGAAGAACCAGGCAAC
GAAAACGATAAATATGTTGATATAATGAAGACGGATGGCAATGGGGATTCTGCAGAGAAG
TTGCAATTAGACCGAAGTCCTGGTGAGGATTCCATGGAGGAGGATGTTTCAGAGGGTAAA
TTAGCTGATTCTAAGTTGGACTCAGTGAAAGAAATAGATGGAAAGAAAGAAATTGAAGTG
GACGCGAATAGGGAGGTAGGATTTGTTGCTTCTGTGGATGATGCTAGGTCAGCTGCCCAT
ATAGATACCAATGTTGAAGACGATAGTCCCACTGTGCTGTCTATGAAAAGAAAACTTCAT
GATCAAAGAACAGCAACTGGGAGCAATGATATTATAAAGAGGCAGCGTAGATGGAATTCA
GAAGATCTTAAAATTCCTAACAACAAGAAAGGTGATGCTGTGGCCTCAACTACCCCCAAG
GATTTTTTCCAGCCCTCTTTGAGACGTAGTTTCTCTAGATCTGATTCAATGGCCAAGGAG
GAACCACCAAAAGAACGTGTGGTTCCCCCATCATCAAAAGTGCCTACTAATTCTCTCTTG
ATCGAAAATTTTCTGCGCCCTTTCACCTTGAAAGCGGTGCAAGAGCTACTTAGCAAGACG
GGTACTGTGACAAATTTCTGGATGGACGCTATTAAAACCCACTGCTTTGTTTCTTTTTCA
TCTGTAGAAGAAGCTATAGAAACTCGAAATGCTGTATACAATCTGCAATGGCCTCCACAT
GGAGGAAAGCTACTTGTTGCTGAGTTTGTTGATCCCCAGGGAGTGAAAGATAAGGTTGAA
GCACCACCTCAATCTCCTTCAACTCATGCAACTCCTGTGACCACAATCCCGGCTGCGGCC
CTGCCTTCTGCCCAGTCCCAACCATCCCCAAGGCAACAGATGCAGAACAAGCAACTTCAA
CCTGAGAAACTTCCACCACCTCCACTTCCTGAGAAACTTGACCCTCCAATTGTCACTCTG
GATGATCTCTTTAAAAAGACAAAGGCAACACCTCGCATTTACTATTTGCCCTTGTCTGAT
GAACAAGTTGCAGATAAGTTGAAGGCGCAAGGGAAGATTATCAAGCAGTAG

Peptide Sequence

PEP ID

XP_016456977.1
PEP Infomation

PREDICTED: apoptotic chromatin condensation inducer in the nucleus-like isoform X5 [Nicotiana tabacum]
Sequence

MSSPYPIIDNPPIDQLKVTELKEELKRRKLPIKGLKQELVKRLAEAILQEQDAAQSKSEN
DSDSTLGPKDEMAEPVDSENSKDDFDVGNITDKKADEKISEVDAAENRVQSDEGKFSTEE
PVGGAISTMVEKDPIDQFGDAKSSAPTEEDQIAEVSVVQTGEHVSVSVESATALSGQDSL
KYETQNESGDLKEQLENPISNSSLVEEKVSSSILERQVSEVSPVLGFQVKSDFVSTDVSI
GEKTELMDNVIANDVKLELDVKPEMVQLLSSSNVPDDAKLHPMDVEEPHDKKVSTEEPGN
ENDKYVDIMKTDGNGDSAEKLQLDRSPGEDSMEEDVSEGKLADSKLDSVKEIDGKKEIEV
DANREVGFVASVDDARSAAHIDTNVEDDSPTVLSMKRKLHDQRTATGSNDIIKRQRRWNS
EDLKIPNNKKGDAVASTTPKDFFQPSLRRSFSRSDSMAKEEPPKERVVPPSSKVPTNSLL
IENFLRPFTLKAVQELLSKTGTVTNFWMDAIKTHCFVSFSSVEEAIETRNAVYNLQWPPH
GGKLLVAEFVDPQGVKDKVEAPPQSPSTHATPVTTIPAAALPSAQSQPSPRQQMQNKQLQ
PEKLPPPPLPEKLDPPIVTLDDLFKKTKATPRIYYLPLSDEQVADKLKAQGKIIKQ

Transcript Sequence

Gene sequence data has not been registered.